miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|73864759|gb|DT467498.1|DT467498 TTTTTTAATGTAATAAATATAAAATTTCCTGAAATATTATTAAGAAAATATATAGCATTAGCAGCACAAATTCTGAGATT
TATTCCTTCAGTACCATCCTGTAATTTGGATGGACTGGGATTTTCTGATGAAAATGGATTAACCTATAGAGAAACAAACA
GTGCACTGACATTTTATGTCATTACCGTCTGGAAAAATCTAGCAGTGAAAAATATTTGAAATTAACCTTCCAGTGCTGAT
GCTCCAGATATAATCTCAATCAACTCCGTGGTGATTGAAGCTTGATGGGTTCTATTATATGTAAGAGTCAGGCGATCAAG
CATGTCGCCGACATTTCTGCTTGAGCTATCCATAGCAGACATCCTTGCTCCTTGCTCACTACAAGCATTCTCCAAAACCG
CATTGAACATGACCCAAACAAACAAAAGGGCAAACAAAGCGGGGGGATCATATCTGTAATTCATGAACTAGAAAGTGAAA
GTCTTAAGTTCGGGTTCGGTTGGCCGAGGGCTTCAAAGGCTAATAACATCATCATCATCATCATCATCGTCGTCATCATC
ATCATCATCATCATCATCATCATATAGGTGTGTGTTGGTATTGACGACGAATCTGCAGTTATCGTGTCTACCTTATTTCT
GTTCACCAACCGTTCGTCTAAATGCTTAGTCCCTTGCTTCCTCTTCTCCCAGTGCATCCCCTCTGTTTATAT




Most similar to sp|P26360|ATPG3_IPOBA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P26360|ATPG3_IPOBA ATP synthase subunit gamma, mitochondrial
           OS=Ipomoea batatas GN=ATPC PE=1 SV=2
          Length = 326

 Score =  116 bits (290), Expect = 2e-25
 Identities = 60/66 (90%), Positives = 62/66 (93%)
 Frame = -3

Query: 422 FVWVMFNAVLENACSEQGARMSAMDSSSRNVGDMLDRLTLTYNRTHQASITTELIEIISG 243
           F  V+FNAVLENACSEQGARMSAMDSSSRN G+MLDRLTLTYNRT QASITTELIEIISG
Sbjct: 261 FSSVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISG 320

Query: 242 ASALEG 225
           ASALEG
Sbjct: 321 ASALEG 326